BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015F04LP1|AL426876
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1589 512 e-145
>3x_Contig1589
Length = 10239
Score = 512 bits (258), Expect = e-145
Identities = 280/286 (97%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 6 gaacatgcataaatactggaatgggtacactacgtccagtttgaagttccatgactatca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gaacatgcataaatactggaatgggtacactacgtccagtttgaagttccatgactatca 227
Query: 66 gtaagcagtttcacatgtctatttggtatccttaaccttctggtgatacacctcagtgtt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gtaagcagtttcacatgtctatttggtatccttaaccttctggtgatacacctcagtgtt 167
Query: 126 attgcattcgagatttctaactagcactgtttcacgcagagatatatattgttgatatta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 attgcattcgagatttctaactagcactgtttcacgcagagatatatattgttgatatta 107
Query: 186 tcaacatatgatgaaaagtttcacgagatcaagcaacttgacaagacaaagctgcgaagt 245
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tcaacatatgatgaaaagtttgacgagatcaagcaacttgacaagacaaagctgcgaagt 47
Query: 246 cagacaggactctgtggtatctcatcaatt-ggtagatagtttccc 290
||||||||||||||| ||||||| ||| || ||||||||| |||||
Sbjct: 46 cagacaggactctgtagtatctcctcacttaggtagatagattccc 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8600
Number of Sequences: 1807
Number of extensions: 8600
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)